DE API Documentation

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This document describes the endpoints used to performing searches of user data.

Table of Contents

Indexed Information

For each file and folder stored in the iPlant data store, its ACL, system metadata, and user metadata are indexed as a JSON document. For files, file records are indexed, and for folders, folder records are indexed.

In addition, CyVerse metadata (non-iRODS metadata) is indexed in a child document, and tags are indexed separately in their own way as well.

Basic Usage

For the client without administrative privileges, Terrain provides endpoints for performing searches and for checking the status of the indexer.

Search Requests

Terrain provides search endpoints that allow callers to search the data by name and various pieces of system and user metadata. It supports the all the queries in the [ElasticSearch query DSL] (http://www.elasticsearch.org/guide/en/elasticsearch/reference/current/query-dsl-queries.html) for searching.

Each field in an indexed document may be explicitly used in a search query. If the field is an object, i.e. an aggregate of fields, the object’s fields may be explicitly referenced as well using dot notation, e.g. acl.access.

Endpoints

This endpoint searches the data index and retrieves a set of files and/or folders matching the terms provided in the query string.

Request Parameters

The following additional URI parameters are recognized.

Parameter Required? Default Description
q yes*   This parameter holds a JSON encoded search query. See query syntax for a description of the syntax.
type no any This parameter restricts the search to either files or folders. It can take the values any, meaning files and folders, file, only files, and folders, only folders.
tags yes*   This is a comma-separated list of tag UUIDs. This parameter restricts the search to only entities that have at least of the provided tags.
includeTrash no false This parameter allows the result set to contain matching files and folders from the user’s DE trash. A value true allows trash, and a value of false excludes it.
offset no 0 This parameter indicates the number of matches to skip before including any in the result set. When combined with limit, it allows for paging results.
limit no 200 This parameter limits the number of matches in the result set to be a most a certain amount. When combined with offset, it allows for paging results.
sort no score:desc See sorting

* At least q or tags is required.

Sorting

The result set is sorted. By default the sort is performed on the score field in descending order. The sort request parameter can be used to change the sort order. Its value has the form field:direction where field is one of the fields of a match record and direction is either asc for ascending or desc for descending. Use dot notation to sort by one of the nested fields of the match records, e.g., entity.label will sort by the label field of the matched entities. If no :direction is provided, the search direction will default to desc.

Response

When the search succeeds the response document has these additional fields.

Field Type Description
total number This is the total number of matches found, not the number of elements in the matches array.
offset number This is the value of the offset parameter in the query string.
matches array This is the set or partial set of matches found, each entry being a match record. It contains at most limit entries and is sorted by descending score.
execution-time number This is the number of milliseconds that it took to perform the query and get a response from elasticsearch.

Match Record

Field Type Description
score number an indication of how well this entity matches the query compared to other matches
type string the entity is this type of filesystem entry, either "file" or "folder"
entity object the file record or folder record matched

Example

$ curl -H "$AUTH_HEADER" \
> "http://localhost:8888/secured/filesystem/index?q=\\{\"wildcard\":\\{\"label\":\"?e*\"\\}\\}&type=file&tags=64581dbe-3aa1-11e4-a54e-3c4a92e4a804,6504ca14-3aa1-11e4-8d83-3c4a92e4a804&offset=1&limit=2&sort:desc" \
> | python -mjson.tool
{
    "matches": [
        {
            "entity": {
                "creator": "rods#iplant",
                "dateCreated": 1381325224090,
                "dateModified": 1384998366001,
                "fileSize": 13225,
                "id": "6278f8e0-121f-4ce6-a15f-1083cfad6de5",
                "label": "read1_10k.fq",
                "fileType": null,
                "metadata": [],
                "path": "/iplant/home/rods/analyses/fc_01300857-2013-10-09-13-27-04.090/read1_10k.fq",
                "permission" : "own",
                "userPermissions": [
                    {
                        "permission": "read",
                        "user": "rods#iplant"
                    },
                    {
                        "permission": "own",
                        "user": "rodsadmin#iplant"
                    }
                ]
            },
            "score": 1.0,
            "type": "file"
        },
        {
            "entity": {
                "creator": "rods#iplant",
                "dateCreated": 1381325285602,
                "dateModified": 1384998366001,
                "fileSize": 14016,
                "fileType": null,
                "id": "acaeb63d-8e84-412d-89a2-716a6a4dda7e",
                "label": "read1_10k.fq",
                "metadata": [
                    {
                        "attribute": "color",
                        "unit": null,
                        "value": "red"
                    }
                ],
                "path": "/iplant/home/rods/analyses/ft_01251621-2013-10-09-13-28-05.602/read1_10k.fq",
                "permission": "write",
                "userPermissions": [
                    {
                        "permission": "read",
                        "user": "rods#iplant"
                    },
                    {
                        "permission": "write",
                        "user": "rodsadmin#iplant"
                    }
                ]
            },
            "score": 1.0,
            "type": "file"
        }
    ],
    "execution-time" : 300,
    "offset": 1,
    "total": 7
}